MilliporeSigma
  • Regulatory control circuits for stabilizing long-term anabolic product formation in yeast.

Regulatory control circuits for stabilizing long-term anabolic product formation in yeast.

Metabolic engineering (2020-07-28)
Vasil D'Ambrosio, Eleonora Dore, Roberto Di Blasi, Marcel van den Broek, Suresh Sudarsan, Jolanda Ter Horst, Francesca Ambri, Morten O A Sommer, Peter Rugbjerg, Jay D Keasling, Robert Mans, Michael K Jensen
ABSTRACT

Engineering living cells for production of chemicals, enzymes and therapeutics can burden cells due to use of limited native co-factor availability and/or expression burdens, totalling a fitness deficit compared to parental cells encoded through long evolutionary trajectories to maximise fitness. Ultimately, this discrepancy puts a selective pressure against fitness-burdened engineered cells under prolonged bioprocesses, and potentially leads to complete eradication of high-performing engineered cells at the population level. Here we present the mutation landscapes of fitness-burdened yeast cells engineered for vanillin-β-glucoside production. Next, we design synthetic control circuits based on transcriptome analysis and biosensors responsive to vanillin-β-glucoside pathway intermediates in order to stabilize vanillin-β-glucoside production over ~55 generations in sequential passage experiments. Furthermore, using biosensors with two different modes of action we identify control circuits linking vanillin-β-glucoside pathway flux to various essential cellular functions, and demonstrate control circuits robustness and almost 2-fold higher vanillin-β-glucoside production, including 5-fold increase in total vanillin-β-glucoside pathway metabolite accumulation, in a fed-batch fermentation compared to vanillin-β-glucoside producing cells without control circuits.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Antifoam 204, mixture of organic polyether dispersions